PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY56305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 246aa MW: 28141.6 Da PI: 9.0293 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 154.5 | 4.7e-48 | 14 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrF+Ptd+elv +yLk kv +++l++ +i++++iyk++PwdLp + e+e yfFs+++ ky++g+r nrat+sgyWkatg dk++ls+ + GAY56305.1 14 LPPGFRFQPTDDELVFQYLKCKVFSSPLPA-PIIPHINIYKYDPWDLPGN---LEQERYFFSNNEAKYPNGNRINRATASGYWKATGLDKQILSSsriN 108 79***************************9.88***************54...46799************************************98777 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + l+g+kktLvfy+g+ap+ ++tdW+mheyrl GAY56305.1 109 QMLMGMKKTLVFYRGKAPHESRTDWIMHEYRL 140 788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDNFHFVRDG VTRLPPGFRF QPTDDELVFQ YLKCKVFSSP LPAPIIPHIN IYKYDPWDLP 60 GNLEQERYFF SNNEAKYPNG NRINRATASG YWKATGLDKQ ILSSSRINQM LMGMKKTLVF 120 YRGKAPHESR TDWIMHEYRL VTAATNQPSS RNYSKEMENW VICKIFMKKR TRKDDANDGT 180 NGVALPDQPQ PRFYDFMMRD RIGSCAATSS CSSTSSYRGI SGISSNGSEY DDDGESSSGK 240 NINFLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-77 | NAC family protein |