PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY56111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 22776.5 Da PI: 4.9172 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.7 | 1.1e-36 | 13 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v++L++kv+ +++ +vi+++d+y ++Pw+L+ k+ ae ++wyf+s++ +nr+t +gyWk g +++vl++ +++ GAY56111.1 13 LPPGFRFCPTDEELLVHFLQRKVALLPCHP-DVIPDLDLYPYDPWQLNGKALAEGNQWYFYSRK--------TQNRMTGNGYWKPMGIEESVLTRADKK 102 79*************************999.99**************977778899*****997........4589*********************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vglkk +f+ g+a+ g+kt+W+m+eyrl GAY56111.1 103 VGLKKYYIFHLGEASAGVKTNWIMQEYRL 131 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MGDNINANAN VNLPPGFRFC PTDEELLVHF LQRKVALLPC HPDVIPDLDL YPYDPWQLNG 60 KALAEGNQWY FYSRKTQNRM TGNGYWKPMG IEESVLTRAD KKVGLKKYYI FHLGEASAGV 120 KTNWIMQEYR LSDSAAASSS NTSSSRSSKR RVNSKTDYSK WVICRVFERN CDDDDDGAEL 180 SCMDEVFLSL DDLDEISLPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-81 | NAC family protein |