PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 188aa MW: 21571.1 Da PI: 9.015 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.6 | 3.1e-12 | 2 | 52 | 78 | 128 |
NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 t++gyW+ t kd ++ + ++ l+g+kk L+fy +g +k tdW mhey++ GAY55860.1 2 TNAGYWHITSKDSQIEA-TNGLTGTKKFLTFYrRGLPRKEFITDWGMHEYHI 52 789*************9.8889**********5567777789********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
RTNAGYWHIT SKDSQIEATN GLTGTKKFLT FYRRGLPRKE FITDWGMHEY HIKNDASYKR 60 EFVLCCIKRK WNKKKKSGIS TIDEGESSQQ LVFPPHQSPS DRSISNGIHS EKNTPTIPPQ 120 QSQNHNSIYY PQSITNDPPT QLSPSNGENI HTHQPLPLNH SEETTLKYPQ PWADPIKVQE 180 GLQLPLDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 5e-11 | NAC family protein |