PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55840.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 384aa MW: 41369.3 Da PI: 7.7399

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.8	2.9e-55	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv + +++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + + GAY55840.1 15 LPPGFRFHPTDEELITYYLLKKVLDCNFTG-RAIAEVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTCA 112 79***********************999.88***********99999************************************974556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkgek++Wvmheyrle GAY55840.1 113 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 7**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MEITYNYFDN SDAHLPPGFR FHPTDEELIT YYLLKKVLDC NFTGRAIAEV DLNKCEPWEL 60 PAKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT CALVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGKFAYQY LSRSSKDEWV ISRVFQKSSG AIATAAAVAN 180 AVKKSRLSCT ISSSSTFNHS YPEPSSPSSV SLPPLLDHPT IAAAANATTA PNDSCSYDES 240 HAPSDQHVSC FSTIAAAAAA AAASAATATT FNTSSSAFDF TTVPAPVINA DAGAGAACDP 300 FARFGRNNVG LNAFPNLRSL QENLQLPFFF APPASSVAPP PFQGGGGGSN WSTVMQDIGG 360 GGGVVGGGGR LNVGPTELDC MWTY

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MEITYNYFDN SDAHLPPGFR FHPTDEELIT YYLLKKVLDC NFTGRAIAEV DLNKCEPWEL  60
PAKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT CALVGMKKTL  120
VFYRGRAPKG EKSNWVMHEY RLEGKFAYQY LSRSSKDEWV ISRVFQKSSG AIATAAAVAN  180
AVKKSRLSCT ISSSSTFNHS YPEPSSPSSV SLPPLLDHPT IAAAANATTA PNDSCSYDES  240
HAPSDQHVSC FSTIAAAAAA AAASAATATT FNTSSSAFDF TTVPAPVINA DAGAGAACDP  300
FARFGRNNVG LNAFPNLRSL QENLQLPFFF APPASSVAPP PFQGGGGGSN WSTVMQDIGG  360
GGGVVGGGGR LNVGPTELDC MWTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-103	NAC family protein