PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55776.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 294aa    MW: 31321.4 Da    PI: 6.1718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.5e-10142186554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  GAY55776.1 142 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 186
                 99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MANNPNEASS TDDFLEQILG IPNFGSAESG LAASDGGLVA GSPMMLQLSS GDGSSHISAL  60
GGGVSSGYHG QVFPLGLSLE QGKGGFLKPE EASGSGKRFP EEHAIKNVFH GQPLPSPVPA  120
APHPPAMRPR VRARRGQATD PHSIAERLRR ERIAERIRAL QELVPSVNKT DRAAMLDEIV  180
DYVKFLRLQV KVLSMSRVGA PGAVAPLVTT DLPLSSVEDE SGEGVRNQPA WEKWSNDGTE  240
RQVAKLMEEN VGAAMQFLQS KALCIMPISL ATAIYHSQPP ESPNLVKPET NPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147152RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-106bHLH family protein