PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55773.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 448aa MW: 48347.7 Da PI: 6.3311

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.3	9.3e-15	232	287	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr+rr+ +NRe+ArrsR+RK+a + eLe+ + +L ae ++L k l ++++++ GAY55773.1 232 DDKRARRMLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDE 287 68******************************************999888888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MNSVFSADDF SDSFLSSPSP PPASFHALPM NRSQSEWELE KFLQEVTVSP RAISSSSASD 60 NSVPAVIGPS VMSKSRAYEI GDDDVVEIKK SHRDQSLDPP VIPSSTAPVD SDEYRAYLKT 120 KLDLACAAVA LRTAPVKPED KSSLIENQTQ AAKPSELGSQ AMATVNVSTA HDALGTHPKA 180 DFRPLGSADL PAVQARPAAQ VRQSTSGSSR EDSDDDELEG DTETVEGLDS VDDKRARRML 240 SNRESARRSR RRKQAHLNEL ETQAGQLRAE HSSLLKGLTD VNQKYDESAV NNRILKADIE 300 TLRAKVKMAE ETVKRVTGLN PLLLARSDVP GVGMPLVNVP LDASRNATHP MQPNPNQFFH 360 QAIPSISTPT PNHQSLDSSF PSNIQLPTVG NPQSDRGGKN MTETSPLQHA VSLEHVPQGV 420 GHRVSPPGAV PGWDTGLPHA GSKNNKQR

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MNSVFSADDF SDSFLSSPSP PPASFHALPM NRSQSEWELE KFLQEVTVSP RAISSSSASD  60
NSVPAVIGPS VMSKSRAYEI GDDDVVEIKK SHRDQSLDPP VIPSSTAPVD SDEYRAYLKT  120
KLDLACAAVA LRTAPVKPED KSSLIENQTQ AAKPSELGSQ AMATVNVSTA HDALGTHPKA  180
DFRPLGSADL PAVQARPAAQ VRQSTSGSSR EDSDDDELEG DTETVEGLDS VDDKRARRML  240
SNRESARRSR RRKQAHLNEL ETQAGQLRAE HSSLLKGLTD VNQKYDESAV NNRILKADIE  300
TLRAKVKMAE ETVKRVTGLN PLLLARSDVP GVGMPLVNVP LDASRNATHP MQPNPNQFFH  360
QAIPSISTPT PNHQSLDSSF PSNIQLPTVG NPQSDRGGKN MTETSPLQHA VSLEHVPQGV  420
GHRVSPPGAV PGWDTGLPHA GSKNNKQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	254	RRSRRRKQ
2	249	254	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02640.2	5e-45	bZIP family protein