PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55428.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 312aa    MW: 36385.1 Da    PI: 7.5467
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.7e-07112128622
                 -SGGGGTS--TTTTT-S CS
     zf-CCCH   6 CrffartGtCkyGdrCk 22 
                 C+f+++tG C++G rC+
  GAY55428.1 112 CPFHLKTGACRFGQRCS 128
                 ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEDNECRDGG KKLRRVLRAS RIWRRKENEC DEDDDWEYVE EGPTEIIWQG NEIIIRMKKV  60
RVLKKDANPL SKKEDVDRPT SNPLPPQSEA FADHQNAQQE LETVAQQDKV HCPFHLKTGA  120
CRFGQRCSRV YFYPDKSCTL LIKNMHNGPG LAWEQDEGLE SLESAVLAYH SINGRYFAGK  180
QTCSRGMARN FIHCFRNPGG DYEWADLDKP PPRYWVKKMA ALFGYSDESG TWNQERSGQT  240
RNKIDSTNAD RHHYRRSRLR EADRVKSGSG RSHDDERQVH ETTWSRRRSN YHSESRSDEA  300
NSDGSWSDRD RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.13e-95C3H family protein