PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55284.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 365aa MW: 40901.2 Da PI: 8.0559

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176	1.1e-54	16	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv + +++ ++i +vd++k ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat sgyWkatgkdke+++ +++l GAY55284.1 16 LPPGFRFHPTDEELITHYLYKKVLDVCFSC-RAIGDVDLNKNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYR-GKSL 112 79*************************9.89***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+grapkgek++Wvmheyrl GAY55284.1 113 VGMKKTLVFYRGRAPKGEKSSWVMHEYRL 141 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MENVSGVGKE DDQMDLPPGF RFHPTDEELI THYLYKKVLD VCFSCRAIGD VDLNKNEPWE 60 LPWKAKMGEK EWYFFCMRDR KYPTGLRTNR ATVSGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYRGRAPKGE KSSWVMHEYR LDGKFSVHSL PKTAKNEWVL CRVFQKGSGG KRTHISGLAG 180 LGSFGNELGP PGLPPLMDSS PDNGSKTIKS VADSAYVSCF SNSIDLQRNQ KNTTTIENFF 240 NNPPPISVSS NCPDVFPRIP LSSNSFYSPL SVPVPSHAQF PGSVFMQDHS ILRALIENQG 300 SNMSQSFKTE REMISVSQDT GLTADMNPEI SSVVSNLEMV KRPFNDHDAP STSAGPVDFD 360 CFWNY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MENVSGVGKE DDQMDLPPGF RFHPTDEELI THYLYKKVLD VCFSCRAIGD VDLNKNEPWE  60
LPWKAKMGEK EWYFFCMRDR KYPTGLRTNR ATVSGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYRGRAPKGE KSSWVMHEYR LDGKFSVHSL PKTAKNEWVL CRVFQKGSGG KRTHISGLAG  180
LGSFGNELGP PGLPPLMDSS PDNGSKTIKS VADSAYVSCF SNSIDLQRNQ KNTTTIENFF  240
NNPPPISVSS NCPDVFPRIP LSSNSFYSPL SVPVPSHAQF PGSVFMQDHS ILRALIENQG  300
SNMSQSFKTE REMISVSQDT GLTADMNPEI SSVVSNLEMV KRPFNDHDAP STSAGPVDFD  360
CFWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-151	NAC family protein