PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY54794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25825.6 Da PI: 7.8761 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 9.9e-21 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa++ l+g GAY54794.1 35 PRYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 85 68********.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MRRARGAATT TAATKQLIEP NGSAARTAAA AGKEPRYRGV RKRPWGRFAA EIRDPWKKTR 60 VWLGTFDSAE DAARAYDAAA RTLRGPKAKT NFPIHNTNVS SYYPNNNNDP FLDQRLYGSV 120 FHDIQDQQIV NPQRPTTSSM SSTVESFSGP RPPHPPQRSA NLTDGSRRYP RTPPVVPEDC 180 HSDCDSSSSV IDDDGDIALS SCRKSLLPFD LNFPPLDDVD FNGDDDLQCT ALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 3e-34 | ERF family protein |