PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54481.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 430aa MW: 48268.1 Da PI: 5.4272

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171	3.7e-53	29	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv++yLk+kv ++++++ ++i evdiyk ePwdL + +k++++ewyfFs+ dkky +g r nrat++gyWkatgkd+e+ + ++ GAY54481.1 29 LAPGFRFHPTDEELVSYYLKRKVYNRPFRF-NAIGEVDIYKNEPWDLAdfSWMKTRDQEWYFFSPLDKKYVNGARMNRATRKGYWKATGKDREIRR-ES 125 579***********************99.89**********8544889999**********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l+g+kktLvf++grap+g++t+Wvmheyrl GAY54481.1 126 QLIGMKKTLVFHSGRAPDGQRTNWVMHEYRL 156 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MGNEGLALTT TTPATPATPA AAKKNTAALA PGFRFHPTDE ELVSYYLKRK VYNRPFRFNA 60 IGEVDIYKNE PWDLADFSWM KTRDQEWYFF SPLDKKYVNG ARMNRATRKG YWKATGKDRE 120 IRRESQLIGM KKTLVFHSGR APDGQRTNWV MHEYRLVEEE FEQLGPGLAS YVLCRVFHKN 180 NIGPPNGNRY APFVEEEWDD GMATFPGEDA ADEVVAGDDV GTERNAGERM RVEQDSQSIN 240 KEPLNINELP KDAQNDLLDC KRERTDGCPS LCVLNTQAPL PLLQYKRRRQ NDSGSNRSNG 300 SDNSSGAGQD PSSSTTTTAE TATMMATNSA TTAAISALLE FSLMESIEPR ETSCVPTAAP 360 FEANDFDSQM PPDCAKLIKE LKNQVREVVV ERATLKLDLM SAQAMINILH SRIDFLTREN 420 EDLKRKNKAA

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MGNEGLALTT TTPATPATPA AAKKNTAALA PGFRFHPTDE ELVSYYLKRK VYNRPFRFNA  60
IGEVDIYKNE PWDLADFSWM KTRDQEWYFF SPLDKKYVNG ARMNRATRKG YWKATGKDRE  120
IRRESQLIGM KKTLVFHSGR APDGQRTNWV MHEYRLVEEE FEQLGPGLAS YVLCRVFHKN  180
NIGPPNGNRY APFVEEEWDD GMATFPGEDA ADEVVAGDDV GTERNAGERM RVEQDSQSIN  240
KEPLNINELP KDAQNDLLDC KRERTDGCPS LCVLNTQAPL PLLQYKRRRQ NDSGSNRSNG  300
SDNSSGAGQD PSSSTTTTAE TATMMATNSA TTAAISALLE FSLMESIEPR ETSCVPTAAP  360
FEANDFDSQM PPDCAKLIKE LKNQVREVVV ERATLKLDLM SAQAMINILH SRIDFLTREN  420
EDLKRKNKAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-128	NAC family protein