PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54480.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 548aa MW: 61083.6 Da PI: 4.6746

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.3e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yLk+kv +++l++ + i +diyk+ePwdLp k ++k+++kewyfFs dkky +g+r+nrat++gyWk+tgkd++v++ ++ GAY54480.1 10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPdKsRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH-NT 106 579***********************99.88**********9635889999***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv++ grap+ge+t+Wvmheyrl GAY54480.1 107 RTVGMKKTLVYHMGRAPHGERTNWVMHEYRL 137 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MGREFASTSL APGFRFHPTD EELVRYYLKR KVCHRSLRFN PICVTDIYKS EPWDLPDKSR 60 LKTRDKEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR PVHHNTRTVG MKKTLVYHMG 120 RAPHGERTNW VMHEYRLTDD DLEKAGVAQD AFVLCRIFQK SGSGPKNGEQ YGAPFIEEEW 180 EDDEVVDAAL VPGHDVVADE LVVSDDAYFE TNDLDQNIDV ANQSENAPRH LNFYHGESSN 240 HVEHSRDLSP DNQKPMIGVG ATQHNSELMD ARPVKDEYID SSNGVNAGGV NYFLNEPYLD 300 ATDNPQFSDG LYLEANDLSS TVEADSQGFD MVEEYLNFFD ANDDNSEYLT FDASEILGSG 360 DNNSDQVPLT TEVTEVTDQM SMAGQHQVEV HGNDVASTSE QKPDIVKSES DVKYPFLKQA 420 SQMLGNVAAA PAFASEFPTK DAALRLNSLA HPSSSVHVTA GMIRIRNITL SGSGLDWSVG 480 KNGDMNIVFS FDLSQNVISP SHTSFEPAGN IFSGKTGSVV FRSLWLLLFL WIVILSVGFK 540 IGACVSAK

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MGREFASTSL APGFRFHPTD EELVRYYLKR KVCHRSLRFN PICVTDIYKS EPWDLPDKSR  60
LKTRDKEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR PVHHNTRTVG MKKTLVYHMG  120
RAPHGERTNW VMHEYRLTDD DLEKAGVAQD AFVLCRIFQK SGSGPKNGEQ YGAPFIEEEW  180
EDDEVVDAAL VPGHDVVADE LVVSDDAYFE TNDLDQNIDV ANQSENAPRH LNFYHGESSN  240
HVEHSRDLSP DNQKPMIGVG ATQHNSELMD ARPVKDEYID SSNGVNAGGV NYFLNEPYLD  300
ATDNPQFSDG LYLEANDLSS TVEADSQGFD MVEEYLNFFD ANDDNSEYLT FDASEILGSG  360
DNNSDQVPLT TEVTEVTDQM SMAGQHQVEV HGNDVASTSE QKPDIVKSES DVKYPFLKQA  420
SQMLGNVAAA PAFASEFPTK DAALRLNSLA HPSSSVHVTA GMIRIRNITL SGSGLDWSVG  480
KNGDMNIVFS FDLSQNVISP SHTSFEPAGN IFSGKTGSVV FRSLWLLLFL WIVILSVGFK  540
IGACVSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-153	NAC family protein