PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54479.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 519aa MW: 57913.1 Da PI: 4.6832

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.6	2.1e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yLk+kv +++l++ + i +diyk+ePwdLp k ++k+++kewyfFs dkky +g+r+nrat++gyWk+tgkd++v++ ++ GAY54479.1 10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPdKsRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH-NT 106 579***********************99.88**********9635889999***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv++ grap+ge+t+Wvmheyrl GAY54479.1 107 RTVGMKKTLVYHMGRAPHGERTNWVMHEYRL 137 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MGREFASTSL APGFRFHPTD EELVRYYLKR KVCHRSLRFN PICVTDIYKS EPWDLPDKSR 60 LKTRDKEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR PVHHNTRTVG MKKTLVYHMG 120 RAPHGERTNW VMHEYRLTDD DLEKAGVAQE WEDDEVVDAA LVPGHDVVAD ELVVSDDAYF 180 ETNDLDQNID VANQSENAPR HLNFYHGESS NHVEHSRDLS PDNQKPMIGV GATQHNSELM 240 DARPVKDEYI DSSNGVNAGG VNYFLNEPYL DATDNPQFSD GLYLEANDLS STVEADSQGF 300 DMVEEYLNFF DANDDNSEYL TFDASEILGS GDNNSDQVPL TTEVTEVTDQ MSMAGQHQVE 360 VHGNDVASTS EQKPDIVKSE SDVKYPFLKQ ASQMLGNVAA APAFASEFPT KDAALRLNSL 420 AHPSSSVHVT AGMIRIRNIT LSGSGLDWSV GKNGDMNIVF SFDLSQNVIS PSHTSFEPAG 480 NIFSGKTGSV VFRSLWLLLF LWIVILSVGF KIGACVSAK

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MGREFASTSL APGFRFHPTD EELVRYYLKR KVCHRSLRFN PICVTDIYKS EPWDLPDKSR  60
LKTRDKEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR PVHHNTRTVG MKKTLVYHMG  120
RAPHGERTNW VMHEYRLTDD DLEKAGVAQE WEDDEVVDAA LVPGHDVVAD ELVVSDDAYF  180
ETNDLDQNID VANQSENAPR HLNFYHGESS NHVEHSRDLS PDNQKPMIGV GATQHNSELM  240
DARPVKDEYI DSSNGVNAGG VNYFLNEPYL DATDNPQFSD GLYLEANDLS STVEADSQGF  300
DMVEEYLNFF DANDDNSEYL TFDASEILGS GDNNSDQVPL TTEVTEVTDQ MSMAGQHQVE  360
VHGNDVASTS EQKPDIVKSE SDVKYPFLKQ ASQMLGNVAA APAFASEFPT KDAALRLNSL  420
AHPSSSVHVT AGMIRIRNIT LSGSGLDWSV GKNGDMNIVF SFDLSQNVIS PSHTSFEPAG  480
NIFSGKTGSV VFRSLWLLLF LWIVILSVGF KIGACVSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-131	NAC family protein