PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53280.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 125aa    MW: 14259.3 Da    PI: 10.6435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.65.5e-074464222
         AP2  2 gykGVrwdkkrgrWvAeIrd.p 22
                 ++GVr ++ +g+++AeIrd  
  GAY53280.1 44 SFRGVRKRP-WGKFAAEIRDgK 64
                59*******.**********33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MNAQNISDSE FAILDSIRSG NDNNVTASSD VACFNMQLRR LQKSFRGVRK RPWGKFAAEI  60
RDGKKKDWGK SLAWGLMIHL RMLHWLYDRA ASRFTAKKLS LIFPHLIGSK SSNTECWLTE  120
SPNAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-14ERF family protein