PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY53279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 20026.5 Da PI: 10.1033 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.7 | 3e-18 | 72 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g ++AeIrd s+n+k +r++lg+f t+e+Aa a+++a+ +l+g GAY53279.1 72 CFRGVRRRP-WGTFAAEIRD-SKNKKGARVWLGTFVTPEDAALAYDRAAFRLHG 123 69*******.**********.334456**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MYTENISESE FAILKSIRQY LLEDDGFDFD LFPTPFPSES TTSSDDCNSS GIAAVATTPR 60 TPESQHHHVR RCFRGVRRRP WGTFAAEIRD SKNKKGARVW LGTFVTPEDA ALAYDRAAFR 120 LHGQKAKLNF PHLVASNTEV NRVKTKNRLA STEPPSSSST SSEASMLKRR RLMNQLGF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 168 | 172 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-27 | ERF family protein |