PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY53277.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 151aa MW: 17257.6 Da PI: 11.663 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.1e-20 | 41 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ + +++AeIrd ++ ng +r++lg+++t+e+Aa a+++a+ +l+g GAY53277.1 41 LFRGVRRRP-WRKFAAEIRDRKNkNG--ARVWLGTYDTPEDAALAYDRAAFRLHG 92 69*******.**********555476..**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 151 aa Download sequence |
MGINLPFLIP HSQIVDSNHV AVTDTTTPQT PETRHHVQRC LFRGVRRRPW RKFAAEIRDR 60 KNKNGARVWL GTYDTPEDAA LAYDRAAFRL HGRKAKLYFP HLVGSNIEAI RVSNNNKKPS 120 SSSSSASSES PKLKRRRLQP GFENGIKQWR S |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 134 | 138 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-32 | ERF family protein |