PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53256.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Nin-like

Protein Properties

Length: 1012aa MW: 110829 Da PI: 5.294

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.7e-29	600	651	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ GAY53256.1 600 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 651 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MEHPFSPKEK GTGYWASPRA PMEPLDCGTR NSNSGDLFNN FSDLLNFDAY AGWCNSPSVT 60 DQMFTSYGFS SFQSTPCASF DTSNVMASNS SVASEGGGTS NAMESSFDRG DRIGFQQTST 120 DCYPINTNDA DDLVPKQSSG VYQENNTNMS NSMICRPVPP SLDEKMLRAL SFFKLSSGGG 180 ILAQVWVPRK QGDDYILSTS DQPYLLDQML AGYREVSRKF TFSAEAKPGT FLGLPGRVFS 240 SKVPEWTSNV AYYNEAEYAR VTHAVNHAVR SCIALPVFQF PEMSCSAVLE IVSVKEKPNF 300 DAEIENICNA LQAVNLRTTA PPRLLPQVSS ELNISRNQKA ALAEITDVLR AVCHAHRLPL 360 ALTWIPCNYD EEAVDEVIKV RVRHSNTSSD GKSVLCIEGT ACYVNDSDMQ GFVHACSEHY 420 LEEGQGVAGK ALQSNHPFFF PDVKLYDITE FPLVHHARKF GLNAAVAIRL RSTYTGDDDY 480 ILEFFLPVTI KGSSEQQLLL NNLSGTMQRM CRSLRTVSDA ELIQDEGSKF GFQKEVVSNF 540 PPMVMSRRNS QSALLDSDFN SIEKITLSVS NSKSGLEADG PSEQVMSGSR RHMEKKRSTA 600 EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLKKIQT 660 VLNSVQGVEG GLKFDPTTGG FVAAGSIIQE FDAQKSSLHP DKNMPVRNSE SITKDSTSIP 720 PTLSIDGEKF VVKVEEDECS VDKNQVGPLS MLIQNSSKGE LNKSSVNLID CSEDSKLILT 780 DAGPFWQARL GTAAWDSPDT ASMVSYYAKG GEKGARSKNG LQLESSDCHF VSQSSNSLAA 840 ADNMDTRREG DDGIIENNQP TTSSTTDSSN GSGSLAHASS VSSPSFEEGK HLKIHPGSDD 900 IGSKIIVKAT YKEDIIRFKF DPSAGCFQLY EEVARRLKLQ NGTFQLKYLD DEEEWVMLVS 960 DSDLQECFDI LESLGKRSVR FLVRDISCNV GSSGSSNCFL AGSSNCFLAG VS

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MEHPFSPKEK GTGYWASPRA PMEPLDCGTR NSNSGDLFNN FSDLLNFDAY AGWCNSPSVT  60
DQMFTSYGFS SFQSTPCASF DTSNVMASNS SVASEGGGTS NAMESSFDRG DRIGFQQTST  120
DCYPINTNDA DDLVPKQSSG VYQENNTNMS NSMICRPVPP SLDEKMLRAL SFFKLSSGGG  180
ILAQVWVPRK QGDDYILSTS DQPYLLDQML AGYREVSRKF TFSAEAKPGT FLGLPGRVFS  240
SKVPEWTSNV AYYNEAEYAR VTHAVNHAVR SCIALPVFQF PEMSCSAVLE IVSVKEKPNF  300
DAEIENICNA LQAVNLRTTA PPRLLPQVSS ELNISRNQKA ALAEITDVLR AVCHAHRLPL  360
ALTWIPCNYD EEAVDEVIKV RVRHSNTSSD GKSVLCIEGT ACYVNDSDMQ GFVHACSEHY  420
LEEGQGVAGK ALQSNHPFFF PDVKLYDITE FPLVHHARKF GLNAAVAIRL RSTYTGDDDY  480
ILEFFLPVTI KGSSEQQLLL NNLSGTMQRM CRSLRTVSDA ELIQDEGSKF GFQKEVVSNF  540
PPMVMSRRNS QSALLDSDFN SIEKITLSVS NSKSGLEADG PSEQVMSGSR RHMEKKRSTA  600
EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLKKIQT  660
VLNSVQGVEG GLKFDPTTGG FVAAGSIIQE FDAQKSSLHP DKNMPVRNSE SITKDSTSIP  720
PTLSIDGEKF VVKVEEDECS VDKNQVGPLS MLIQNSSKGE LNKSSVNLID CSEDSKLILT  780
DAGPFWQARL GTAAWDSPDT ASMVSYYAKG GEKGARSKNG LQLESSDCHF VSQSSNSLAA  840
ADNMDTRREG DDGIIENNQP TTSSTTDSSN GSGSLAHASS VSSPSFEEGK HLKIHPGSDD  900
IGSKIIVKAT YKEDIIRFKF DPSAGCFQLY EEVARRLKLQ NGTFQLKYLD DEEEWVMLVS  960
DSDLQECFDI LESLGKRSVR FLVRDISCNV GSSGSSNCFL AGSSNCFLAG VS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein