PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY53253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 250aa MW: 28247.9 Da PI: 7.4569 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.9 | 1.3e-42 | 87 | 215 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk..dkevlskkg 97 lpp+frF+Ptdeel+v +L++kv+g++l++ ++i+e+d yk+ePw+Lp+k+ ++ ew+fFs+ d+++++ +++nr+t gyW+ g+ dk ++++++ GAY53253.1 87 LPPCFRFSPTDEELLVLFLRRKVAGRRLSI-NFITEIDFYKFEPWELPSKALFGDYEWFFFSPMDRRNPEASEPNRVTGVGYWEDAGSgtDKIITTAGR 184 79****************************.99***************87778999****************************776543888888899 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l g+kk Lv+ykg+ap+g kt+W+mheyrl GAY53253.1 185 KLAGIKKALVYYKGNAPNGIKTEWIMHEYRL 215 99***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MRKYKDKDGN EKAECNHCKK TFDGSSKKGT THLKNHLDRC RANNNKRKGG AAGDENESSS 60 FKTTDLATPI VAVEDNGDVF DHDLISLPPC FRFSPTDEEL LVLFLRRKVA GRRLSINFIT 120 EIDFYKFEPW ELPSKALFGD YEWFFFSPMD RRNPEASEPN RVTGVGYWED AGSGTDKIIT 180 TAGRKLAGIK KALVYYKGNA PNGIKTEWIM HEYRLIEPPP NNDSSKTIGF CEEYLNAGAV 240 VVLFIFSSPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 8e-61 | NAC family protein |