PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53250.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 410aa    MW: 46257.3 Da    PI: 9.9293
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18.1e-17332383255
         AP2   2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ rg++ AeIrd +   g   +r++lg+f tae+Aa a+++a+ +++g
  GAY53250.1 332 RYRGVRLRP-RGKYGAEIRDqF---GgGGARIWLGTFETAEDAALAYDRAAYRMRG 383
                 7********.8*********77...3345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MVRSEQNENK RRKLKSKVWD EFTKYKGEDG TDWAICSLCK KEFDDSSKKG TTHLKNHLDR  60
CRAKIKFKGG SGDTGKSIKT RDLADINEKS VIDLIKNSFD AKGMTTFQVN QEEKGSGIVV  120
RNQQNEKKGK KLKSKVWDVF TKYKGEDGMD WAKCSICEKE FDGSSKKGTT HLKNHLQRCR  180
ANYKRKEAGT GGDDDKSVKT MPIVIKEKSV KDSFDAVPEA SRCHLLGELE SELSVSTSSN  240
WTHSRRSSSF SRLYPCLADN WGNLPLVEND SEDIVLYNLL RDALTVGWVP QLRQDEAHQG  300
FQANFHVEYA KAPAVPQADQ SATALVPGEG RRYRGVRLRP RGKYGAEIRD QFGGGGARIW  360
LGTFETAEDA ALAYDRAAYR MRGSRAHLNF PLLLLVSREP EPVKIRARKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-25ERF family protein