PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52903.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 276aa MW: 31207.4 Da PI: 7.5588

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.9	8.7e-08	5	35	6	36
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++++e++ fC ++ lC C H+ GAY52903.1 5 CDVCDKEEASVFCSADEAALCVACDRRVHHA 35 **************************99744 PP
2	zf-B_box	29.7	1.3e-09	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e + C+ ++e ++ lfC++++ lC++C +Hk H GAY52903.1 54 ESPLCDICQERRALLFCQEDRAILCRECDIPIHKAseytkkH 95 6789*****************************876666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MKIWCDVCDK EEASVFCSAD EAALCVACDR RVHHANKLAS KHPRFNLVSP SYKESPLCDI 60 CQERRALLFC QEDRAILCRE CDIPIHKASE YTKKHNRFLL TGVKLTASAS VTFNTTYNPS 120 PSSSTCCDTT KTTTTTSIDD QKKISSSSHS NSIFSSNSTP RDNHISDTSS ISEYLMETLP 180 GWRVDDFLDP SSYATSTNVL CKICDQDLER KMVYFSLLED LAIWVPLFSS QNGLLKGFEE 240 STEEARRLRV PQIRGQSVKK NRHVWLKLIS NVRLIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	7e-62	DBB family protein