PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30013.1 Da PI: 6.8399 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +k++G ++W++ ++ g+ R++k+c++rw +yl GAY52553.1 14 KGPWTPEEDRILIVHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++++ +lG++ W++Ia +++ gRt++++k+ w+++l GAY52553.1 67 RGNFSKEEEETIINLHDMLGNR-WSAIAGRLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRAPCCEKM GLKKGPWTPE EDRILIVHIK KHGHPNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF SKEEEETIIN LHDMLGNRWS AIAGRLPGRT DNEIKNVWHT HLKKKAAAVL 120 KQNQKANTNN NNSNSDDHKQ NSKATTAHDH QSAESAMSPQ ASSSSDELSS VTTGETNNNN 180 NNNSDQYCMD KHVKSDHEQN VDSFESFPVI DESFWTDTSL SENSSNLTSD FGGGLNEFAM 240 GHHDYGGGMD FWYNILVTSG ADSLTLPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 8e-74 | MYB family protein |