PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 23321.7 Da PI: 9.7598 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 127 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r++ grW+AeIrdp+ r r++lg+f+t e Aa+a+++a+ +++g GAY52401.1 127 KYRGIRQRQ-CGRWAAEIRDPR----RaVRVWLGTFDTDEAAARAYDRAAIEFRG 176 8*****999.7*********82....48************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MENSSRSSQL KALVNREEEH NVMVSTLKHV ITGHIIAIDE HQAATLSFSS NGKGMEENKQ 60 VSCTMAKLIL PDAVTCQVCE INGCLGCNLF PPSEEYCTTP TPGTSNENEV IMKNEKKKKK 120 KKKKKNKYRG IRQRQCGRWA AEIRDPRRAV RVWLGTFDTD EAAARAYDRA AIEFRGLKAK 180 LNFPLSDYIA KNYSEPEQRS KFKPPN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 116 | 122 | KKKKKKK |
2 | 116 | 124 | KKKKKKKKK |
3 | 116 | 125 | KKKKKKKKKK |
4 | 117 | 123 | KKKKKKK |
5 | 117 | 125 | KKKKKKKKK |
6 | 118 | 124 | KKKKKKK |
7 | 119 | 125 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-30 | ERF family protein |