PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51800.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BBR-BPC
Protein Properties Length: 423aa    MW: 47331.9 Da    PI: 10.3535
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind350.15e-1071324231301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssia..erdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllal 84 
                 mddd+ + rn+gyyep+  +k +lglqlms+++  +rd+k+    r+ n+ +++ ++a+++rd         m++ +rd+++++        ++k+l++
  GAY51800.1 132 MDDDALNMRNWGYYEPS--FKGHLGLQLMSTMPmvDRDTKPflpgRDPNI-MIGANGAFHPRDcvvseasipMNY-MRDSWISQ--------RDKFLNM 218
                 9***9999*******99..************9999***************.************************.9*******........789**** PP

   GAGA_bind  85 llvenslasalpvgvqvlsgtksidslqqlse.pqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkke 181
                 l+ +         + +vl++t+ ++slq+l+  p+++ +      +       p +e++ +++e +  kkrq +   k++kakk+kk    +k+++ ++
  GAY51800.1 219 LPSNP--------TFGVLPETSGAHSLQMLQPpPNMSRDDRLaPDRVAPDRIVPKVEEPVVKTEGAPLKKRQGGGASKTPKAKKPKK----PKDNNGTA 305
                 *9544........5899************66656765444331333344444555566777788888899999999*******9999....33444444 PP

   GAGA_bind 182 saderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydls 280
                    +r+k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++
  GAY51800.1 306 V--QRVKPAKKSMDVVINGIDMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFA 402
                 4..689********************************************************************************************* PP

   GAGA_bind 281 npvDLkdhWAkHGtnkfvtir 301
                 np+DL++hWA+HGtnkfvtir
  GAY51800.1 403 NPIDLRTHWARHGTNKFVTIR 423
                 ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MVERHDALTP MPTILTTKPM RNSKSIYNLS ELIHNLSYTN KFKFLFTLLL ENIKAPIYSI  60
SFKAFEFQSS KIHIFRSLSF SFFLTLSPLS FSFLGLFLSP LSSLSQSQRF LSPLSSEGQN  120
PKEPFTTPQL FMDDDALNMR NWGYYEPSFK GHLGLQLMST MPMVDRDTKP FLPGRDPNIM  180
IGANGAFHPR DCVVSEASIP MNYMRDSWIS QRDKFLNMLP SNPTFGVLPE TSGAHSLQML  240
QPPPNMSRDD RLAPDRVAPD RIVPKVEEPV VKTEGAPLKK RQGGGASKTP KAKKPKKPKD  300
NNGTAVQRVK PAKKSMDVVI NGIDMDISGI PIPVCSCTGA PQQCYRWGCG GWQSACCTTN  360
VSMYPLPMST KRRGARIAGR KMSQGAFKKV LEKLAAEGYN FANPIDLRTH WARHGTNKFV  420
TIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-109BBR-BPC family protein