PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51764.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 412aa MW: 46685.3 Da PI: 4.9739

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d+ +++l+sws++g sf+v+++ +fak++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i+ GAY51764.1 16 FLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLLKNIH 103 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k GAY51764.1 104 RRKP 107 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MDESQGQGSS NSPAPFLIKT YEMVDDPLTN SLVSWSQSGG SFIVWNPPDF AKDLLPQYFK 60 HNNFSSFVRQ LNTYGFRKID PDQWEFANEE FIRGQRHLLK NIHRRKPVHS HSTQSPTPLT 120 ETERNEFEAK IERLKKENSL LQLELRRREG GNHEFEYHVQ SVRERLRYLE NRQTQMIACL 180 ANLLKKPGFS SALNQQAEVH SKKRRLLRPT TIEYFDDVKS ASLSVNEQKE NPDATSDPSP 240 ALNLEQIDRL ESSVDFWTFF LYGLGEAFNQ DVYDFGVLRP VSAVTDDEIE EGVSSEEHDV 300 LSNVSSPKSM DVHSSPKQVA SSENPVDGAS ATEDETANSS VKNRANDQFW EQFLTETPAA 360 TASSSARPES TDPESGSAYV NKPAEADSKK FWWHSNNLDT LTRHFGNLTS AG

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MDESQGQGSS NSPAPFLIKT YEMVDDPLTN SLVSWSQSGG SFIVWNPPDF AKDLLPQYFK  60
HNNFSSFVRQ LNTYGFRKID PDQWEFANEE FIRGQRHLLK NIHRRKPVHS HSTQSPTPLT  120
ETERNEFEAK IERLKKENSL LQLELRRREG GNHEFEYHVQ SVRERLRYLE NRQTQMIACL  180
ANLLKKPGFS SALNQQAEVH SKKRRLLRPT TIEYFDDVKS ASLSVNEQKE NPDATSDPSP  240
ALNLEQIDRL ESSVDFWTFF LYGLGEAFNQ DVYDFGVLRP VSAVTDDEIE EGVSSEEHDV  300
LSNVSSPKSM DVHSSPKQVA SSENPVDGAS ATEDETANSS VKNRANDQFW EQFLTETPAA  360
TASSSARPES TDPESGSAYV NKPAEADSKK FWWHSNNLDT LTRHFGNLTS AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-75	HSF family protein