PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51746.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 385aa MW: 45281.5 Da PI: 6.7143

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.6	1.2e-21	103	199	1	86
trihelix 1 rWtkqevlaLiearr........emeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+++v++Li ++ +++ + +k ++W+ vsk+m erg+++sp+qC++k++nlnk ykk+++ +++ +++++++ + + GAY51746.1 103 KWTEEMVKLLIYTVSyirqfalsNVG------NgrnepsflQKIGKWKVVSKVMVERGYRVSPQQCEDKFNNLNKTYKKLNDVLGRGmSCKVVENPKIL 195 7***********944444333333......133455677********************************************889999999999 PP trihelix 83 dqle 86 d+++ GAY51746.1 196 DEID 199 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEGQSSLTGG MIMEGLNSFQ DLQGAMQLHH QQDPNFYQPS CVVQVQPESV FPLRWQYMEE 60 QPLSYIDYNE DQRGKNLLMD CAIPGVDEHY AVEGIRTPWR RIKWTEEMVK LLIYTVSYIR 120 QFALSNVGNG RNEPSFLQKI GKWKVVSKVM VERGYRVSPQ QCEDKFNNLN KTYKKLNDVL 180 GRGMSCKVVE NPKILDEIDI PEGKKDNAKK ILSSKQLFFE QMCSYHSGNQ LCLPHDPDLQ 240 RSLQLALSKK LDYDKQEQDP GAYTQDNETE DSNLKSMDYN GILEDHSQHA LTDLEGFHPE 300 GSTADGLWEQ WVAFRSCRLK LQRLQVNARI LRLENRRFKW QRICWRKNRE LIRMRLENER 360 LKIENERIEL ELKYKEMRAD YDLTV

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEGQSSLTGG MIMEGLNSFQ DLQGAMQLHH QQDPNFYQPS CVVQVQPESV FPLRWQYMEE  60
QPLSYIDYNE DQRGKNLLMD CAIPGVDEHY AVEGIRTPWR RIKWTEEMVK LLIYTVSYIR  120
QFALSNVGNG RNEPSFLQKI GKWKVVSKVM VERGYRVSPQ QCEDKFNNLN KTYKKLNDVL  180
GRGMSCKVVE NPKILDEIDI PEGKKDNAKK ILSSKQLFFE QMCSYHSGNQ LCLPHDPDLQ  240
RSLQLALSKK LDYDKQEQDP GAYTQDNETE DSNLKSMDYN GILEDHSQHA LTDLEGFHPE  300
GSTADGLWEQ WVAFRSCRLK LQRLQVNARI LRLENRRFKW QRICWRKNRE LIRMRLENER  360
LKIENERIEL ELKYKEMRAD YDLTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	2e-86	Trihelix family protein