PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51487.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 525aa MW: 59991.9 Da PI: 6.372

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.7	2.9e-26	77	163	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA+ +GFsvrk+ ++sk +g++++r+f+Cs+eg+r++++++ + +++r+etrtgC a++ ++++ dgk++vt++e +HnH+ GAY51487.1 77 RFYNKYARVLGFSVRKDWANRSKVHGQVVSRKFTCSREGYRRKDRRD-MNVKKHRKETRTGCLAHMIITRQPDGKYRVTHFEANHNHD 163 5*****************************************999.9999*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MPRSMNKDTD EFGTPLDEDT DSRLQTSNEL DLNVEQDSRS PKVIPATLPT LSSKEDANPN 60 GILKIGTQFE SDEHAYRFYN KYARVLGFSV RKDWANRSKV HGQVVSRKFT CSREGYRRKD 120 RRDMNVKKHR KETRTGCLAH MIITRQPDGK YRVTHFEANH NHDNIDPNND QIVQLQKELS 180 SAQAAEADLP DNLDLQSRAD FELMSGRFEW AVVYGRNTYF LDTKGSHVVE SLSNKLKSCL 240 SSDQDMLHAF KHLERVVDEQ RYKEFIATDE MGRSTPRIMA NVIMLKHASE VYTTKAFELF 300 QREYEKCLNL EEVIEGVEKI LTSKPEEVQG ITSSSTGANA SESENAKVCL DENTVEDQNE 360 VGRAKWTKEN KSCVPHRRKL KNIHGRSSKS RRVQNIQAQS PNTVNCISSP PPAFVSPQAP 420 TMESLYNLEA NQVVQCMYGQ PDLLVDQQPN TDLYQQPNFF SDQHDSPGQT QLLEETLIRS 480 TYHDSVPIST HLRQAMELDL QSSSFLLCDH SCRYRASDPS YLEPK

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MPRSMNKDTD EFGTPLDEDT DSRLQTSNEL DLNVEQDSRS PKVIPATLPT LSSKEDANPN  60
GILKIGTQFE SDEHAYRFYN KYARVLGFSV RKDWANRSKV HGQVVSRKFT CSREGYRRKD  120
RRDMNVKKHR KETRTGCLAH MIITRQPDGK YRVTHFEANH NHDNIDPNND QIVQLQKELS  180
SAQAAEADLP DNLDLQSRAD FELMSGRFEW AVVYGRNTYF LDTKGSHVVE SLSNKLKSCL  240
SSDQDMLHAF KHLERVVDEQ RYKEFIATDE MGRSTPRIMA NVIMLKHASE VYTTKAFELF  300
QREYEKCLNL EEVIEGVEKI LTSKPEEVQG ITSSSTGANA SESENAKVCL DENTVEDQNE  360
VGRAKWTKEN KSCVPHRRKL KNIHGRSSKS RRVQNIQAQS PNTVNCISSP PPAFVSPQAP  420
TMESLYNLEA NQVVQCMYGQ PDLLVDQQPN TDLYQQPNFF SDQHDSPGQT QLLEETLIRS  480
TYHDSVPIST HLRQAMELDL QSSSFLLCDH SCRYRASDPS YLEPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-19	FAR1 family protein