PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51385.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 295aa    MW: 33159.8 Da    PI: 4.7041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20105154255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+W+AeIrd + +   r+r++lg+f taeeAa  +++a+ +l+g
  GAY51385.1 105 KYRGVRMRP-WGKWAAEIRDpF-Q---RTRVWLGTFETAEEAALVYDQAAIRLKG 154
                 8********.**********55.3...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNQLVSSSSG AKYREQRSTT TTVVKPSCSG TKVIRVSVTD GDATESSSDE DEERGARVKK  60
QINEIRIVEC SKSNEISCSE SVKQRMKDRS IPLKKRVGGR SYDNKYRGVR MRPWGKWAAE  120
IRDPFQRTRV WLGTFETAEE AALVYDQAAI RLKGPHAQTN FLRPPQTDQT FDFVTSGYDS  180
EKESQSQTPT SAIPSPTSVL RFHSNEEIEL AKTELFNLES DRCCPSQDSF QIYDSELLDS  240
ATPAPIFFDD KMCVPLLKEN LGDVSVDLGG DFDSCISEWD VDNYFQDPPP LPDSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46310.12e-40ERF family protein