PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY51103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26852.6 Da PI: 4.5489 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 63 | 113 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g GAY51103.1 63 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFRTPEMAARAHDVAALSIKG 113 68*****998.**********843...6**********************99876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MASSSELSNI SSEEAESTST NSSTNDSLSQ QRSRSDTGCR SENHPGSSRP KRKRESESGT 60 KHPVYRGVRM RSWGKWVSEI REPRKKSRIW LGTFRTPEMA ARAHDVAALS IKGDSAVLNF 120 PELVEVLPRP VSLLPRDIQT AATKAASMII DPSSSTCDEV SAQPQQDEQA ELGEIVQLPN 180 IEGSFDFDSA ESHNELNIPI HDDLFDGWIY PPVVQDFVAE FPEHILAAES LIPGDFEASS 240 VWD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-57 | ERF family protein |