PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 312aa MW: 35048.9 Da PI: 7.3642 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.5e-09 | 14 | 57 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ n+ E+ RR ++++ +++L +l+P++ + iL +A+ YI +Lq GAY50900.1 14 RAQRNIKEQHRRMHMKDLISQLASLIPSN----------SKILDEATSYITHLQ 57 8889************************9..........79************9 PP | |||||||
2 | HLH | 38.4 | 2.2e-12 | 162 | 210 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ n+ E+ RR ++++ +++L +++P + Kls +iL +A+ YI +Lq GAY50900.1 162 RAQRNIKEKHRRMHMKDLISQLASVIPCN-----SKLSMPQILDEATSYIMHLQ 210 8889************************8.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MAEENSSAAG SSSRAQRNIK EQHRRMHMKD LISQLASLIP SNSKILDEAT SYITHLQKNK 60 ESLERRRALL KEEDHSEPTV MNITTSGSTL EVNLICGSNR NFMFHEIISV LEEGAAEIIN 120 VTQFNSGDRV IFSVLSKVAH LYYLNPKNMV GENCSAAGSS SRAQRNIKEK HRRMHMKDLI 180 SQLASVIPCN SKLSMPQILD EATSYIMHLQ KNKESLERKK ALLKGDDHPE PTVMNISTSG 240 STLEVNLICG LNRNFMFHEI ISVLEEEGAE VINVTQFNSG DRVIFSVQSK AINSRIGVET 300 ERVQERLKDL IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 2e-33 | bHLH family protein |