PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 312aa MW: 35049.9 Da PI: 7.1117 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.7e-13 | 14 | 62 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ n+ E+ RR ++++ +++L +l+P++ Kls eiL +A+ YI +Lq GAY50899.1 14 RAQRNIKEQHRRMHMKDLISQLASLIPSN-----SKLSMPEILDEATSYITHLQ 62 8889************************8.....7******************9 PP | |||||||
2 | HLH | 26.2 | 1.5e-08 | 167 | 210 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ n+ E+ RR ++++ +++L +++P + + iL +A+ YI +Lq GAY50899.1 167 RAQRNIKEKHRRMHMKDLISQLASVIPCN----------SKILDEATSYIMHLQ 210 8889************************9..........79************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MAEENSSAAG SSSRAQRNIK EQHRRMHMKD LISQLASLIP SNSKLSMPEI LDEATSYITH 60 LQKNKESLER RRALLKEEDH SEPTVMNITT SGSTLEVNLI CGSNRNFMFH EIISVLEEGA 120 AEIINVTQFN SGDRVIFSVL SKVAHLYYLN PKNMVGENCS AAGSSSRAQR NIKEKHRRMH 180 MKDLISQLAS VIPCNSKILD EATSYIMHLQ KNKESLERKK ALLKGDDHPE PTVMNISTSG 240 STLEVNLICG LNRNFMFHEI ISVLEEEGAE VINVTQFNSG DRVIFSVQSK AINSRIGVET 300 ERVQERLKDL IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 3e-29 | bHLH family protein |