PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 159aa MW: 17974.3 Da PI: 6.6851 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 3e-09 | 14 | 57 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ n+ E+ RR ++++ +++L +l+P++ + iL +A+ YI +Lq GAY50896.1 14 RAQRNIKEQHRRMHMKDLISQLASLIPSN----------SKILDEATSYITHLQ 57 8889************************9..........79************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MAEENSSAAG SSSRAQRNIK EQHRRMHMKD LISQLASLIP SNSKILDEAT SYITHLQKNK 60 ESLERRRALL KEEDHTEPTV LNITTSDSTL EVNLICGSNR NFMFHEIINV LEEGAAEVIN 120 VTQFNSGNRV IFSVLSKAIN SRIGVETDRI QERLKELIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 1e-25 | bHLH family protein |