PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50893.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 173aa    MW: 19523.1 Da    PI: 6.8035
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.98.8e-141462255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r+  n+ E+ RR ++++ +++L +l+P++      Kls  eiL +A+ YI +Lq
  GAY50893.1 14 RAQRNIKEKHRRTHMKDLISQLASLIPSS-----SKLSMPEILDEATSYITHLQ 62
                8889************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MAEENSSAAG SSSRAQRNIK EKHRRTHMKD LISQLASLIP SSSKLSMPEI LDEATSYITH  60
LQKNKESLER RRALLKEEDH YEPTVMNITT SGSTLEVNLI CGSNRNFMFH EIISVLEEGA  120
AEVINVTQFN SGDRVIFSVL SKVHFRPTQA EAVNSRIGVE TERVQERLKE LIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.13e-28bHLH family protein