PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50708.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 370aa MW: 42314.3 Da PI: 4.8691

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	82.3	9.8e-26	8	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 lp Gf+F+P+deel+ yLkkkv+g ++l+e i+++++y+ +P+++ + + + ++++yfF++ +kk+++g+r r++ g W+ k++ GAY50708.1 8 LPHGFQFRPSDEELIELYLKKKVSGIFIPLAEYfIRDCNLYEEKPSEIWNshggPFLNADEDLYFFTQLKKKSSKGSRIDRKVGssGGSWQGEDAGKDI 106 699**********************9998888**********743455333478899**************75544899****** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s ++ ++g kk + + k + + W+mhey+l GAY50708.1 107 VSGqSKIKIGSKKRFRYEK--KGCEDHGAWIMHEYTL 141 99745667****984..4444589*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MQEHRPFLPH GFQFRPSDEE LIELYLKKKV SGIFIPLAEY FIRDCNLYEE KPSEIWNSHG 60 GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGSWQGE DAGKDIVSGQ SKIKIGSKKR 120 FRYEKKGCED HGAWIMHEYT LHLPKNQATN YVLCRLRKNQ PTGHGIMKYG SAKKRKLKDF 180 QDNSNQSEQV AVIEMDRLLT HQQNKQQNYM DYQEVSCSSS DMMSEQSLAG GMGLASSVTE 240 QHSVIDDHMQ QQQSRQISVP NLEFYYGPSM EMMMSHFDQM ICNQQSDSGN NMLQGRETGE 300 NYHCYSESIV EVPMAVPESL VQHEDSDGLP ELIEEDYSFL EDLLHDDAEE PIGDVRGSFG 360 LMLDLDDLLS

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MQEHRPFLPH GFQFRPSDEE LIELYLKKKV SGIFIPLAEY FIRDCNLYEE KPSEIWNSHG  60
GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGSWQGE DAGKDIVSGQ SKIKIGSKKR  120
FRYEKKGCED HGAWIMHEYT LHLPKNQATN YVLCRLRKNQ PTGHGIMKYG SAKKRKLKDF  180
QDNSNQSEQV AVIEMDRLLT HQQNKQQNYM DYQEVSCSSS DMMSEQSLAG GMGLASSVTE  240
QHSVIDDHMQ QQQSRQISVP NLEFYYGPSM EMMMSHFDQM ICNQQSDSGN NMLQGRETGE  300
NYHCYSESIV EVPMAVPESL VQHEDSDGLP ELIEEDYSFL EDLLHDDAEE PIGDVRGSFG  360
LMLDLDDLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03200.1	2e-16	NAC family protein