PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50701.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 340aa    MW: 39006.5 Da    PI: 4.8484
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.31.2e-2681411128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 
                 lp Gf+F+P+deel+ +yLkkkv+g  ++l+e  i+++++y+ +P+++       + + ++++yfF++ +kk+++g+r  r++    g+W+     k++
  GAY50701.1   8 LPHGFQFRPSDEELIEHYLKKKVSGIFIHLAEYfIRDCNLYEKKPSEIWDshggPFLNADEDLYFFTQLKKKSSKGSRIDRKVGssGGTWQGEDAGKDI 106
                 699************************9998878**************632455333478899******************75544899********** PP

         NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +s  ++ ++g kk + + k  +    +  W+mhey+l
  GAY50701.1 107 VSGqSKIKIGSKKPFRYEK--QGCEDHGAWIMHEYTL 141
                 99745667********984..4444589*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MQEHRPFLPH GFQFRPSDEE LIEHYLKKKV SGIFIHLAEY FIRDCNLYEK KPSEIWDSHG  60
GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGTWQGE DAGKDIVSGQ SKIKIGSKKP  120
FRYEKQGCED HGAWIMHEYT LHLPKNQATS YVLCRLRKNQ PTGHDIMKYG SAKKRKLKDF  180
QDNSNQSEQV ADIEMDRPFT HQQNQQQNYM DYQEVSCSSA GMMSEQSLAG LASSVYEPSM  240
EMMMSHFDQM ICNQQYDSGN NMLQGRETGE NYHCHSESIV EVPMAVPESL VQHEDSDGLP  300
ELIEEDYSFL EDLLHDDAEE PIGDVRCSFG LMLDLDDLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.16e-18NAC family protein