PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50698.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 194aa    MW: 22150.5 Da    PI: 10.4496
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31.1e-2181211106
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 
                 lp Gf+F+P+deel+ +yLkkkv+g  ++l+e  i+++++y+ +P+++       + + ++++yfF++ +kk+++g+r  r++    g+W+     k++
  GAY50698.1   8 LPHGFQFRPSDEELIEHYLKKKVSGIFIPLAEYfIRDCNLYEKKPSEIWDshggPFLNADEDLYFFTQLKKKSSKGSRIDRKVGssGGTWQGEDAGKDI 106
                 699************************9998888**************632455333478899******************75544899********** PP

         NAM  93 lsk.kgelvglkktL 106
                 +s  ++ ++g kk +
  GAY50698.1 107 VSGqSKIKIGSKKRF 121
                 996445568888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MQEHRPFLPH GFQFRPSDEE LIEHYLKKKV SGIFIPLAEY FIRDCNLYEK KPSEIWDSHG  60
GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGTWQGE DAGKDIVSGQ SKIKIGSKKR  120
FFTKNKVVRI TGLGSCTSTL YICPRIKLPI MCFAGSERIN PSGMNLMKLR RSAKEKKGEG  180
FSRQQQSIRT SSRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.12e-14NAC family protein