PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49676.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 325aa    MW: 36793.1 Da    PI: 6.3547
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.72.9e-2951353127
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya....tgkrknratksgyWkatgkdkevlsk 95 
                  G+ F+P dee++ + Lkkk  ++ +++ e+ike+d y+++PwdL   +++++ ++ +yfFsk + + a    +g++++r+tksg+Wk+tg+d e+++k
  GAY49676.1   5 TGIGFRPLDEEII-DLLKKKRLDRGFSV-ETIKEIDFYSFDPWDLAglSEFQSMQDVCYFFSKPKYRGAkrkrSGQQQHRKTKSGTWKKTGSDSEMKRK 101
                 699**********.99************.88**************8534777777789****976544423337999*******************998 PP

         NAM  96 .kgelvglkktLvfykg.rapkgektdWvmheyr 127
                  ++e++g k+ Lvf ++  +++ ++t+W+mhe +
  GAY49676.1 102 nSTEVIGNKDYLVFIHNdATSEKVNTKWLMHEIA 135
                 66778*********9773556678********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MDSLTGIGFR PLDEEIIDLL KKKRLDRGFS VETIKEIDFY SFDPWDLAGL SEFQSMQDVC  60
YFFSKPKYRG AKRKRSGQQQ HRKTKSGTWK KTGSDSEMKR KNSTEVIGNK DYLVFIHNDA  120
TSEKVNTKWL MHEIAIADDP LYKENFVVCR LERKTCDKKL GVSTTDKHQS SQDFASSSSI  180
NVVEDMSLES AQPPDRHLVS KTTQIVENIN LKNHLQPSEN LFSCNEDSAA TTSLDSGLSP  240
KNTSTGLQLV LHPVLESWRS PDEQRATYSI DVVENSFEVI AFSESQQLPN HLTSCSRNHV  300
AENTSTGLQL VPHPVLESLR ESKDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
172101KRKRSGQQQHRKTKSGTWKKTGSDSEMKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02230.18e-18NAC family protein