PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49675.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 523aa    MW: 59123 Da    PI: 4.7228
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.83.7e-3551323128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 +GfrF Ptdee++ + Lkkk  +  + + ++ike+d y++ePw+Lp  +++++ee+ wyfF++ d kya+++r nr t++g+Wk+tg+  ++++k ++e
  GAY49675.1   5 VGFRFYPTDEEII-RLLKKKRLNPGFFV-HTIKEIDFYSFEPWELPchSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKySTE 101
                 7************.89999999999888.78***************6448888999*************************************998889 PP

         NAM  99 lvglkktLvfy.kgrapkgektdWvmheyrl 128
                 ++g+k++L f  + +a+k  kt+Wvmhe ++
  GAY49675.1 102 VIGTKRILSFScHDSASKKAKTEWVMHEIAV 132
                 9*********9666899999********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MNSLVGFRFY PTDEEIIRLL KKKRLNPGFF VHTIKEIDFY SFEPWELPCH SEIQSEEEVW  60
YFFCEPDYKY AKSRRVNRGT NEGTWKKTGN GSKIKRKYST EVIGTKRILS FSCHDSASKK  120
AKTEWVMHEI AVEDDPDYKK DFVVCRLERK REKKMLGVVS TKRKRDEKLG VSTNDGDQSC  180
QNLTSKRSHI AEDTTRNHVV EKEDLVSNRT RVAENTVLAS EVQATDHSIS DSRDHVAENI  240
VDNSVEAETR QFAEFNPQGD GYNGLNEASV LALQSPVYPE QELSYSNGSS CGNGLLNSEF  300
DSEQVDDQFN SQRDFQNKDS PNESGQTTSD FLSSKSDEGV YLEDGSDMDS ETFIAKQTWS  360
PQHRGYFKVN VDAAANADKQ VPGLGAVIRD ETENVIAAAI NPSKFYGDVS FVEAEAVEWV  420
DKDGAPAMAN NNKEKFGPWM VVTRKGRTEY GKDSANPEQQ RYPKQLANPP DDKDEREVNT  480
MANYASDPKL VFRHVSEDTM FDDENNVVNE TPGMHEGAVL GLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149165RKREKKMLGVVSTKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.18e-29NAC family protein