PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49631.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 193aa    MW: 21403.4 Da    PI: 5.05
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1859109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  GAY49631.1  59 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 109
                 68*****998.**********843...6***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MTEWNSSEAD SNNSPSSSGS SSLTNPPTGK PVTSDPDPTP TPDAAKKQKK RPRDDSKHPV  60
YRGVRMRAWG KWVSEIREPR KKSRIWLGTF STPEMAARAH DVAALSIKGA SAILNFPKLA  120
GYDESSESGN DFVFVDSSWY DYNYDYNYYY NIEEEGECFN FMNNDSMQVQ NSSSGGGGCG  180
AITAGFESLL WQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-41ERF family protein