PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49313.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 395aa MW: 44146.7 Da PI: 5.7262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.6	4.8e-53	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +ekewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s +g+ GAY49313.1 21 LPPGFRFHPTDEELITFYLASKVFNGTFCG-VEIAEVDLNRCEPWELPDVAKMGEKEWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVCSGsSGA 118 79***********************877.45***********8888899**********************************986788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+gekt+Wvmheyrl GAY49313.1 119 LLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 148 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MLAMEDVLSE LNGDEVNEQG LPPGFRFHPT DEELITFYLA SKVFNGTFCG VEIAEVDLNR 60 CEPWELPDVA KMGEKEWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VCSGSSGALL 120 GMKKTLVFYK GRAPRGEKTK WVMHEYRLDG DFSYRHTCKE EWVICRIFNK AVVSGEKKNG 180 LLLQGQNYLF EAAATAGACL PALLDAPGPA TTTLLLECQS QNHNPILENL PNHFVNQQQD 240 NHHHHLFPVN ALFETSAVTN QHILMNNITE NIGNNTSPSM LFKALLSHQD FSCCNELAPS 300 PKHCKTEANF SHIQLPPATA ADDNSNDNWS NCYWMDSKIQ PNPYSNPLFS EFDCSFPGLT 360 QPSAFAATAV NDMSTSIAFN RTGFQVVEKS WPLGA

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MLAMEDVLSE LNGDEVNEQG LPPGFRFHPT DEELITFYLA SKVFNGTFCG VEIAEVDLNR  60
CEPWELPDVA KMGEKEWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VCSGSSGALL  120
GMKKTLVFYK GRAPRGEKTK WVMHEYRLDG DFSYRHTCKE EWVICRIFNK AVVSGEKKNG  180
LLLQGQNYLF EAAATAGACL PALLDAPGPA TTTLLLECQS QNHNPILENL PNHFVNQQQD  240
NHHHHLFPVN ALFETSAVTN QHILMNNITE NIGNNTSPSM LFKALLSHQD FSCCNELAPS  300
PKHCKTEANF SHIQLPPATA ADDNSNDNWS NCYWMDSKIQ PNPYSNPLFS EFDCSFPGLT  360
QPSAFAATAV NDMSTSIAFN RTGFQVVEKS WPLGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	1e-106	NAC family protein