PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49161.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 134aa    MW: 15405.3 Da    PI: 9.985
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.2e-071953447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +  eEde++++++ +lG++        ++  Rt++ +k++w+++
       GAY49161.1 19 FIDEEDEIIIKLHSLLGNK--------LP-SRTDNKIKNYWNTH 53
                     557**************99........**.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MIFVLGVKPQ NLGKSTLNFI DEEDEIIIKL HSLLGNKLPS RTDNKIKNYW NTHIKRKLLN  60
RGLDPQTHRP VNQIHNHNNF NKYTINNNQE IIQPKNLIKP KSKSSFDNDN TTTTTNNNYG  120
ISGTTTDEEP PQNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.17e-29MYB family protein