PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48711.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 379aa    MW: 41479.4 Da    PI: 4.6664
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-103013411055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  GAY48711.1 301 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 341
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MEGAIAEGEW SSLSGMYTTD QEADFMAQLL RNCPVSAELE GSSSFGNSSS PTFWPNHGAN  60
DYGSYYSLDI GAYSGGGGSS IFSPYSSSQE SFYLSDSHQI LGTNNINHNN INSSISMDFC  120
MGDANCNTSS YLIDNQGQDE CLNNQENNNI SDGNKPELGF PVKALDMKNE SEMQATEPAV  180
EEKLNNPSES SKKRSRNATD VQKNNKRNVK SKKNQKRAVT AISNTEEDND TNNNENENIK  240
SIVGANRLQL SSSCCSEDES NASQDQIGGE DSSKGKVALN LSGKTRASRG SATDPQSLYA  300
RKRRERINER LRILQNLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSD DLWMYAPIAY  360
NGMNIGLDHL KLAAASKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-51bHLH family protein