PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48608.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 328aa MW: 36884.9 Da PI: 7.5854

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	6e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ GAY48608.1 19 PRLRWTPELHRCFVHAIDRLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	49.4	1.1e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+ +lGg+ t+k++ + m kg+t ++ks++q+y+ GAY48608.1 20 RLRWTPELHRCFVHAIDRLGGHqkaTPKLVLQLMDvKGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MGSCGRSGAV RQYIRSKVPR LRWTPELHRC FVHAIDRLGG HQKATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRSDLGRQ DKTQQRRQSS SEQHDRGCCI DEVNDLNHNH HMGFHDYPSS 120 ESIKKSDAQC IYNNINTPFL PSKSKARTET RGCSISDQNL QCSQGICESV SNPYPFDDYL 180 QQKQNNKAKE GYGTGAAFRY KQAHSNALSS PFSQPHDDDH LYTLKYAVAV EESDYILKVN 240 KNDSDELIHM HQNNVLRGQA EDEEADDFEL SLGLSLPHPS SQRSNASSTS DIGAEAISLY 300 SRSNAKDCFG SSRRYNINLD LSIALCGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	5e-37	G2-like family protein