PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48406.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 628aa MW: 72048 Da PI: 9.8625

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115	7.5e-36	35	147	2	115
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF+P+d elvv+yL++k+ +++l+ + ik v++y+++P++L +++k+ +e e+yfF++rd+ky++g r+nra+++gyWkatg dk+v++ +g+l GAY48406.1 35 PPGYRFKPHDGELVVYYLRRKLLNQPLPP-NQIKVVELYRFNPNTLTERYKSlGEMECYFFTPRDRKYRNGLRPNRAAADGYWKATGADKPVKH-NGSL 131 9***********************999.77**********9766664777***********************************.999 PP NAM 100 vglkktLvfykgrapk 115 vg kk Lvfykg+a+ GAY48406.1 132 VGFKKALVFYKGKAQG 147 **********999865 PP
2	NAM	141.9	3.7e-44	201	327	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF+P+d el+v+yL++k +++l+ + ikev++yk++P +L +k+k +e+ewyfF++r++ky++g+r+nra+ +g+Wkatg dk++++ ++ + GAY48406.1 201 PPGYRFKPHDIELLVHYLRRKRMNEPLPP-NRIKEVHLYKFNPDTLSEKYKPfGENEWYFFTPRERKYKNGTRPNRAAGDGFWKATGADKPIKN-DDVV 297 9***********************999.77**********9555444899**********************************9.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg kk Lvfy g+ p+g kt+W+mhe+rle GAY48406.1 298 VGFKKALVFYMGKPPRGDKTEWIMHEFRLE 327 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MVKTLVEKTL MEKALKSKST GHHLIADDSY FDSFPPGYRF KPHDGELVVY YLRRKLLNQP 60 LPPNQIKVVE LYRFNPNTLT ERYKSLGEME CYFFTPRDRK YRNGLRPNRA AADGYWKATG 120 ADKPVKHNGS LVGFKKALVF YKGKAQGDKD QDPNGQDRNG KNPNGQGPKG KRPIDHTRDA 180 SPPVRNRMNA AKGPEFDDNF PPGYRFKPHD IELLVHYLRR KRMNEPLPPN RIKEVHLYKF 240 NPDTLSEKYK PFGENEWYFF TPRERKYKNG TRPNRAAGDG FWKATGADKP IKNDDVVVGF 300 KKALVFYMGK PPRGDKTEWI MHEFRLEGPP RTRISGDDMR LDDWVLCKIY KKRDQDRSKL 360 SSSRPSTSRQ DDSISGQDDP QSDTEFQDNG AIDMGVEDSA TLPNETFMPH GPEGPRIIDM 420 SGFYNQGGFL NSYDDTFIYH QSHFVNHNVP YSQGRVPEMP NYNVPYAQGR VTGMPNHNVP 480 YSQGRLPRLA IHDVSDSQGR FPGMTNQNVS VSVSQGRFPA IAPYSYNNSM GQSSPWTQHI 540 MIPTANQNPN QAAESSAAAR GRPFQAYPHQ HMFATSNRNP NQLAEISYQQ QQDLSTHILI 600 NICLLLLIKW QNHHQLQQQD HFKVWRAI

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MVKTLVEKTL MEKALKSKST GHHLIADDSY FDSFPPGYRF KPHDGELVVY YLRRKLLNQP  60
LPPNQIKVVE LYRFNPNTLT ERYKSLGEME CYFFTPRDRK YRNGLRPNRA AADGYWKATG  120
ADKPVKHNGS LVGFKKALVF YKGKAQGDKD QDPNGQDRNG KNPNGQGPKG KRPIDHTRDA  180
SPPVRNRMNA AKGPEFDDNF PPGYRFKPHD IELLVHYLRR KRMNEPLPPN RIKEVHLYKF  240
NPDTLSEKYK PFGENEWYFF TPRERKYKNG TRPNRAAGDG FWKATGADKP IKNDDVVVGF  300
KKALVFYMGK PPRGDKTEWI MHEFRLEGPP RTRISGDDMR LDDWVLCKIY KKRDQDRSKL  360
SSSRPSTSRQ DDSISGQDDP QSDTEFQDNG AIDMGVEDSA TLPNETFMPH GPEGPRIIDM  420
SGFYNQGGFL NSYDDTFIYH QSHFVNHNVP YSQGRVPEMP NYNVPYAQGR VTGMPNHNVP  480
YSQGRLPRLA IHDVSDSQGR FPGMTNQNVS VSVSQGRFPA IAPYSYNNSM GQSSPWTQHI  540
MIPTANQNPN QAAESSAAAR GRPFQAYPHQ HMFATSNRNP NQLAEISYQQ QQDLSTHILI  600
NICLLLLIKW QNHHQLQQQD HFKVWRAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-58	NAC family protein