PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48398.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 584aa MW: 67778.3 Da PI: 10.0197

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.2	4.1e-46	64	189	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF+P+d elvv+yL++k+ +++l+ + ik v++y+++P++L +++k+ +e ewyfF++rd+ky++g r+nra+++gyWkatg dk+v++ +++l GAY48398.1 64 PPGYRFKPHDGELVVYYLRRKILNQPLPP-NQIKVVELYRFNPNTLTERYKSlGEMEWYFFTPRDRKYRNGLRPNRAAADGYWKATGADKPVKH-NDSL 160 9***********************999.77**********9666664778***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg kk Lvfykg+apkg kt+W+mhey + GAY48398.1 161 VGFKKALVFYKGKAPKGDKTNWIMHEYIV 189 ***************************75 PP
2	NAM	141.3	5.7e-44	399	525	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF+P+d el+v+yL++k +++l+ + ikev++yk++P + +k+k +e+ewyfF++r++ky++g+r+nra+ +g+Wkatg dk+++s ++ + GAY48398.1 399 PPGYRFKPHDTELLVHYLRRKRMNEPLPP-NRIKEVHLYKFNPDTVSEKYKPfGENEWYFFTPRERKYKNGTRPNRAAGDGFWKATGADKPIKS-DEVV 495 9***********************999.77**********9555444899***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg kk Lvfy g+ p+g kt+W+mhe+rle GAY48398.1 496 VGFKKALVFYMGKPPRGDKTEWIMHEFRLE 525 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MKDQKQKEQL GVEGKNPNGQ NPCGENPNGE SPKKQSDDAS LVRHPVKSTG HHLIADDSYF 60 DSFPPGYRFK PHDGELVVYY LRRKILNQPL PPNQIKVVEL YRFNPNTLTE RYKSLGEMEW 120 YFFTPRDRKY RNGLRPNRAA ADGYWKATGA DKPVKHNDSL VGFKKALVFY KGKAPKGDKT 180 NWIMHEYIVN NPPQKQKGRN DMRLDDWVLC RIYKKTKQSA KASTRKRENS EEDQQSRSEV 240 ATQSQDSEQI SVDEKAKMLP KTEIFKPEGL GIFDVPDYYN QGRFFSAYDN SPYANFQDGH 300 QGNSQNWLPL IPQSGFQQML HHNPTWESPM KPEEFGYLPF NRKQGDKDQD PNGHDRNGKN 360 PNGQGPKGKR PIDHIHDASP PVKNRMNAAQ GPEFDDSFPP GYRFKPHDTE LLVHYLRRKR 420 MNEPLPPNRI KEVHLYKFNP DTVSEKYKPF GENEWYFFTP RERKYKNGTR PNRAAGDGFW 480 KATGADKPIK SDEVVVGFKK ALVFYMGKPP RGDKTEWIMH EFRLEGPPRT RISGDDMRLD 540 DWVLCKIYKK RDQDRSKLSL KNFHGLPRCF QNPKREVGKS NATI

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MKDQKQKEQL GVEGKNPNGQ NPCGENPNGE SPKKQSDDAS LVRHPVKSTG HHLIADDSYF  60
DSFPPGYRFK PHDGELVVYY LRRKILNQPL PPNQIKVVEL YRFNPNTLTE RYKSLGEMEW  120
YFFTPRDRKY RNGLRPNRAA ADGYWKATGA DKPVKHNDSL VGFKKALVFY KGKAPKGDKT  180
NWIMHEYIVN NPPQKQKGRN DMRLDDWVLC RIYKKTKQSA KASTRKRENS EEDQQSRSEV  240
ATQSQDSEQI SVDEKAKMLP KTEIFKPEGL GIFDVPDYYN QGRFFSAYDN SPYANFQDGH  300
QGNSQNWLPL IPQSGFQQML HHNPTWESPM KPEEFGYLPF NRKQGDKDQD PNGHDRNGKN  360
PNGQGPKGKR PIDHIHDASP PVKNRMNAAQ GPEFDDSFPP GYRFKPHDTE LLVHYLRRKR  420
MNEPLPPNRI KEVHLYKFNP DTVSEKYKPF GENEWYFFTP RERKYKNGTR PNRAAGDGFW  480
KATGADKPIK SDEVVVGFKK ALVFYMGKPP RGDKTEWIMH EFRLEGPPRT RISGDDMRLD  540
DWVLCKIYKK RDQDRSKLSL KNFHGLPRCF QNPKREVGKS NATI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-58	NAC family protein