PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48329.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 262aa    MW: 29029.3 Da    PI: 5.0308
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-1976126155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  GAY48329.1  76 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 126
                 68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MEGCVVLMKR VPTVHRVEQG DPFVKSSDIN NDYKMSEPQN SSEAESSSSN SSLSPTNAHQ  60
DSKKIKRMRD QSSKHPVYRG VRMRNWGKWV SEIREPRKKS RIWLGTFPTP EMAARAHDVA  120
ALSIKGNSAI LNFPELADSL PRPNSLAPRD VQAAAAKAAQ MDKFDSSSSS SLSSLVSAMD  180
LSTGSEELSE IVELPSLGSS YDYKSSELRN EFVFVDSVDG WMYTPPWFQS VEVEDYQFGV  240
LPESSVFSST NFGLGEGLLW DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-78ERF family protein