PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY48025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 473aa MW: 51776.4 Da PI: 6.9478 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.9 | 4.9e-10 | 268 | 316 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq GAY48025.1 268 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 316 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MGAGDNDDMG FQPRNESAMN CSSGMIPQKL PGMQMNSVPM YKSVSGPDHF YGSGWEPIVS 60 LNQGESFGVS SMVSHNEFAP SYPVALENQG MSSTSNLDQY SSDPSFVELV PKIPGFGSGN 120 FSEMVSSFGL PENAQIASSG CPPNYVPNKE GCYERNSRNV SQSYEDHQIC EEAAIVVATN 180 GKTRKRAPES NSLLNTDKNV EVELQKDPSG DSSGILKEQD EKKQKIEQNT GANMRGKQAA 240 KPTKDSSLSG EAPKEYIHMR AKRGQATNSH SLAERVRREK ISERMRLLQE LVPGCNKITG 300 KAVMLDEIIN YVQSLQQQVE FLSMKLATVN PELNLDIERI LSKDILHARS GSAATIGFSS 360 GMNSSRPYPP GIFQGTMPSI PGANPQFPPL PQSVLDHEFQ SLFQMGYDST SAVDSLGPNG 420 KALEVGALKF GKIRTFQVGK IKMFQVLLTE NLEVPKPKVT HLEKKAKERS REK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-81 | bHLH family protein |