PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47893.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 306aa    MW: 34492.3 Da    PI: 8.8013
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000225476123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  GAY47893.1 54 YSCSFCRREFRSAQALGGHMNVH 76
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEQAGYCWMW NKRKHELNSH FPSTNSYDDS WEEQAFAEDA AGPLGGCIWP PRSYSCSFCR  60
REFRSAQALG GHMNVHRRDR ARLKQSSSSN PQNEIHHHDH QFQNNNDHHL QNNNHPFASL  120
GFHQYPSQQL CNFVYNPSPN SDPVVIASSS SPSRVVSAHP STQKTRPDKT FVIPSLSSPI  180
AQEQQHKRSP ISSPKSCSNS VADKNNSTIV KSACRVKADY VKTDLSVSLN LVVRRTRPTL  240
STGKEAAVGC KRRRTEASSL PFFLKPCSFD HDKDHLQSEE HKILNPSSIE DLDLELRLGD  300
PPPKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.17e-28C2H2 family protein