PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47111.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 407aa MW: 46457.8 Da PI: 6.1877

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	6	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka...eekewyfFskrdkkyatgkrknratk......sgyWkat 86 lp+G+rF P d el+v+yLkkkv++++l+ + i e+++y++ P++L++ k +eke++fF++r++k+++g+r nr+t sgyWk+t GAY47111.1 6 LPVGYRFCPLDWELLVCYLKKKVKNEPLPP-NRIMEIKLYNFTPEQLKQelkvK--YkdlREKEMFFFTPRERKHQNGTRLNRVTGsgpdsgSGYWKST 101 799**********************999.77**********8645442..234577899**************9766666669** PP NAM 87 gkdkevlskkgelvglkktLvfy........kgrapkgektdWvmheyrl 128 g dk+++ kg+lvg kk Lv+y +g++++ ktdW+mhe+r+ GAY47111.1 102 GADKSIKF-KGALVGFKKQLVYYrknpeaggEGEKNDWIKTDWIMHEFRV 150 ***9.999*******7777666668888888*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDLENLPVGY RFCPLDWELL VCYLKKKVKN EPLPPNRIME IKLYNFTPEQ LKQELKVKYK 60 DLREKEMFFF TPRERKHQNG TRLNRVTGSG PDSGSGYWKS TGADKSIKFK GALVGFKKQL 120 VYYRKNPEAG GEGEKNDWIK TDWIMHEFRV PNNPTPRKKD GTNMELDWAL CKIYKKVYKK 180 EKDPPMNHRD DTIESMNHNS ENNGTESTNP TRYNCIMYPE GQSSAGNVNA YSENMQQTFH 240 NSTSLEIPHQ MDSTNHGVVN CTQYGNPNPN PNANQFASPN PYPNPGQNIK DFSCNYSGVA 300 NSIQYANTSQ NDINASSIAF ESMPTQAQVF ADNVNLPEWS SLITAVVDPE IQKLDSYFGI 360 STASKEPLSP LPPLPSNDPL WWPTITDFED DSWCSIYQEN YNAPNGR

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDLENLPVGY RFCPLDWELL VCYLKKKVKN EPLPPNRIME IKLYNFTPEQ LKQELKVKYK  60
DLREKEMFFF TPRERKHQNG TRLNRVTGSG PDSGSGYWKS TGADKSIKFK GALVGFKKQL  120
VYYRKNPEAG GEGEKNDWIK TDWIMHEFRV PNNPTPRKKD GTNMELDWAL CKIYKKVYKK  180
EKDPPMNHRD DTIESMNHNS ENNGTESTNP TRYNCIMYPE GQSSAGNVNA YSENMQQTFH  240
NSTSLEIPHQ MDSTNHGVVN CTQYGNPNPN PNANQFASPN PYPNPGQNIK DFSCNYSGVA  300
NSIQYANTSQ NDINASSIAF ESMPTQAQVF ADNVNLPEWS SLITAVVDPE IQKLDSYFGI  360
STASKEPLSP LPPLPSNDPL WWPTITDFED DSWCSIYQEN YNAPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-34	NAC family protein