PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47110.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 337aa    MW: 39302.7 Da    PI: 6.7164
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.71.2e-45511782128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 p+G+rF P d+el+v+yLkkk+ +++l+  + i++v++y+++P+dL +    ++++eke yfF++rd+ky++g+r+nra+ +gyWkatg dk++++ +g
  GAY47110.1  51 PAGYRFCPFDSELIVYYLKKKIMNERLPP-NRINDVNLYQFNPHDLAEmykGCAEKEKEFYFFTPRDRKYKNGTRPNRAAGEGYWKATGADKSIKH-NG 147
                 89************************999.77**************85233334478899************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 ++vg kktLvfy+g+ pkg kt W+mheyr+
  GAY47110.1 148 AVVGFKKTLVFYEGKPPKGDKTFWIMHEYRV 178
                 9****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MEETKTKMEV KSSVEINNSP ERKLQPLTAA TKSTPVSQRR HDNDSYWDSF PAGYRFCPFD  60
SELIVYYLKK KIMNERLPPN RINDVNLYQF NPHDLAEMYK GCAEKEKEFY FFTPRDRKYK  120
NGTRPNRAAG EGYWKATGAD KSIKHNGAVV GFKKTLVFYE GKPPKGDKTF WIMHEYRVNN  180
DSPPSTRTRL STDMRLDDWV LCRIYYKERS DKSLKSLHRT EDRASTEETN EPDCDKGSAV  240
DFSGYADTYS GYMQHLWQQQ NAFSQIPSFK DVSFDSIVNL DEPFQHDGTS IFGPDCVTND  300
LFWSAYNQEY ICFDQSQLDF SNRFEDTIIV KSNNSHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-55NAC family protein