PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46309.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 340aa MW: 37950.6 Da PI: 5.427

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.5	4.3e-17	45	93	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ L GAY46309.1 45 RSKHSETEQRRRSKINERFQMLRDLIPQN----DQKRDKASFLLEVIEYIQFL 93 899***********************9....9***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MVKSSNNYLE EDEEADLYDK HVNRNNSSSY KGEGKSSEQK ATTHRSKHSE TEQRRRSKIN 60 ERFQMLRDLI PQNDQKRDKA SFLLEVIEYI QFLREKLQMY EGPYQGWTQE PTKLTPWRSH 120 NGPAETYMDQ SQVIKNGSGH ENSVINPGML SNPQNSMESD LDTAAAYKAT DFSPGSATTM 180 VPQNMHAQQN MFAPVGRGGM PTQPLQESVS DVENMVYQPQ TQLWQGRSCA TECAVPNGAL 240 NDQDLMIESG SSSMSNAYSQ GILNALTQAL RSSGVDLSQA SVSVQIDVGK RANDGSTAMA 300 SSSKDNDSHY QNNQVMAQTG VRSFNEDSDR THKRLRTELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G38860.1	5e-66	bHLH family protein