PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45870.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 314aa    MW: 36681.1 Da    PI: 5.4762
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.56.3e-2558142190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fYn+Y+ke GF +r+s+s  +++ +e +++++ Cs  g++++++ +     ++r+etrtgC a+++++++++++w++ ++eleHnH+l+
  GAY45870.1  58 DFYNAYGKERGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIVIRLMDSKRWRIVEVELEHNHALS 142
                 6*********************999*****************99888.....9***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEEVCLNSEP VFDEGDEYEG DGDCQEERGH GAGETHLKRD PPQPTVGLEF DSFDEAYDFY  60
NAYGKERGFG IRVSNSWFRS KRKERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMIVI  120
RLMDSKRWRI VEVELEHNHA LSKVYTKEIF RRFQSEVEGM YSCFNTRRVT ANGPITTYIV  180
KERVEVEGNE KEVKNYEVLY ETSQVDIRCI CSLFNYKGYL CRHALNVLNY NGIEEIPSHY  240
ILARWSKDFK PRGLFDHDFN DVDMYNPLSR YHHLYKLAIP VLEEGAQSQD HYEVAVHELE  300
ELLNRLNLVE ENIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-39FAR1 family protein